BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019G05SP1|AL427523
(868 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1469 1679 0.0
>3x_Contig1469
Length = 9240
Score = 1679 bits (843), Expect = 0.0
Identities = 860/867 (99%), Gaps = 1/867 (0%)
Strand = Plus / Plus
Query: 1 tatacaattgwtcagcactagctattcatcaactcattgaagcagctcgttaaaaatacc 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4766 tatacaattgatcagcactagctattcatcaactcattgaagcagctcgttaaaaatacc 4825
Query: 61 aagttctaattgaagattttggaatgatggagatgaggaggtgtttgactgttgactttt 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4826 aagatctaattgaagattttggaatgatggagatgaggaggtgtttgactgttgactttt 4885
Query: 121 agctgcctcataataacaagtggcatggaagamtttgtctcccacctgtacgcagttgct 180
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4886 agctgcctcataataacaagtggcatggaagaatttgtctcccacctgtacgcagttgct 4945
Query: 181 ccaaatccattctcccagatcttcatcatatttaccatatgtggattcggtacaaatagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4946 ccaaatccattctcccagatcttcatcatatttaccatatgtggattcggtacaaatagg 5005
Query: 241 acactggaacttcatatctgtggcataatccggtactacaatatatttmttcctgagttt 300
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 5006 acactggaacttcatatctgtggcataatccggtactacaatatatttattcctgagttt 5065
Query: 301 agtatagattgcatcagtagaatcttccctgttgttcgcaaatgtaggttgctgttcagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5066 agtatagattgcatcagtagaatcttccctgttgttcgcaaatgtaggttgctgttcagc 5125
Query: 361 agctccagtatcaatatctgttgcaatgatgtcttcttctttaaagtctgcccattgatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5126 agctccagtatcaatatctgttgcaatgatgtcttcttctttaaagtctgcccattgatt 5185
Query: 421 ttcatccaaataccaattcctggattgaatgaccttggtagatgtagtggtgttggactg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5186 ttcatccaaataccaattcctggattgaatgaccttggtagatgtagtggtgttggactg 5245
Query: 481 gatacctttaatcttcttgttgacacggaaatgccaatcaagatgttgtatttccaactc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5246 gatacctttaatcttcttgttgacacggaaatgccaatcaagatgttgtatttccaactc 5305
Query: 541 cttttcttcaagagtattaccaaatctcttaccacatatactacatttattaggttttgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5306 cttttcttcaagagtattaccaaatctcttaccacatatactacatttattaggttttgc 5365
Query: 601 ccgatataagasatgtaccaacttttccgtaattggatggttatcattaagaacaaactg 660
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5366 ccgatataagaaatgtaccaacttttccgtaattggatggttatcattaagaacaaactg 5425
Query: 661 ttgagaaagctgaaggacagatgcgttcaaaatatctaggttttgcgtctggcgttgcgc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5426 ttgagaaagctgaaggacagatgcgttcaaaatatctaggttttgcgtctggcgttgcgc 5485
Query: 721 ctctaratcacctagaatatcctgtaaaagtgaatatgacggtagttgcactgtcttgga 780
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5486 ctctagatcacctagaatatcctgtaaaagtgaatatgacggtagttgcactgtcttgga 5545
Query: 781 ggaatcaaattcaggttctaatttggcagctaaggtagtaatagatgcttctccaggttc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5546 ggaatcaaattcaggttctaatttggcagctaaggtagtaatagatgcttctccaggttc 5605
Query: 841 atgcaagagctcttttttctctcaaca 867
|||||||||||| ||||||||||||||
Sbjct: 5606 atgcaagagctc-tttttctctcaaca 5631
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6687
Number of Sequences: 1807
Number of extensions: 6687
Number of successful extensions: 47
Number of sequences better than 1.0e-20: 1
length of query: 868
length of database: 10,358,551
effective HSP length: 16
effective length of query: 852
effective length of database: 10,329,639
effective search space: 8800852428
effective search space used: 8800852428
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)